医学图像分割的深度学习模型可能会出乎意料地且出乎意料地失败,而与训练图像相比,在不同中心获得的病理案例和图像,标签错误违反了专家知识。此类错误破坏了对医学图像细分的深度学习模型的可信赖性。检测和纠正此类故障的机制对于将该技术安全地转化为诊所至关重要,并且可能是对未来人工智能法规(AI)的要求。在这项工作中,我们提出了一个值得信赖的AI理论框架和一个实用系统,该系统可以使用后备方法和基于Dempster-Shafer理论的失败机制增强任何骨干AI系统。我们的方法依赖于可信赖的AI的可行定义。我们的方法会自动放弃由骨干AI预测的体素级标签,该标签违反了专家知识,并依赖于这些体素的后备。我们证明了拟议的值得信赖的AI方法在最大的报告的胎儿MRI的注释数据集中,由13个中心的540个手动注释的胎儿脑3D T2W MRI组成。我们值得信赖的AI方法改善了在各个中心获得的胎儿脑MRI和各种脑异常的胎儿的最先进的主链AI的鲁棒性。
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限制机器学习系统的故障对于安全至关重要的应用至关重要。为了提高机器学习系统的鲁棒性,已提出了分配鲁棒优化(DRO)作为经验风险最小化(ERM)的概括。然而,由于与ERM的随机梯度下降(SGD)优化器相比,由于可用于DRO的优化器的相对效率相对效率相对低效率,因此在深度学习中的使用受到了严格的限制。我们建议使用硬度加权采样的SGD,这是机器学习中DRO的原则性高效优化方法,在深度学习的背景下特别适合。与实践中的硬示例挖掘策略类似,所提出的算法可以直接实施和计算,并且与用于深度学习的基于SGD的优化器一样有效,需要最小的开销计算。与典型的临时硬采矿方法相反,我们证明了我们的DRO算法的收敛性,用于过度参数化的深度学习网络,并具有RELU激活以及有限数量的层和参数。我们对MRI中胎儿脑3D MRI分割和脑肿瘤分割的实验证明了我们方法的可行性和有用性。使用我们的硬度加权采样进行训练,最先进的深度学习管道可改善自动胎儿脑中解剖学变异的鲁棒性3D MRI分割,并改善了对脑肿瘤分割的图像方案变化的鲁棒性。我们的代码可从https://github.com/lucasfidon/hardnessweightedsampler获得。
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脑小血管疾病的成像标记提供了有关脑部健康的宝贵信息,但是它们的手动评估既耗时又受到实质性内部和间际变异性的阻碍。自动化评级可能受益于生物医学研究以及临床评估,但是现有算法的诊断可靠性尚不清楚。在这里,我们介绍了\ textIt {血管病变检测和分割}(\ textit {v textit {where valdo?})挑战,该挑战是在国际医学图像计算和计算机辅助干预措施(MICCAI)的卫星事件中运行的挑战(MICCAI) 2021.这一挑战旨在促进大脑小血管疾病的小而稀疏成像标记的自动检测和分割方法的开发,即周围空间扩大(EPVS)(任务1),脑微粒(任务2)和预先塑造的鞋类血管起源(任务3),同时利用弱和嘈杂的标签。总体而言,有12个团队参与了针对一个或多个任务的解决方案的挑战(任务1 -EPVS 4,任务2 -Microbleeds的9个,任务3 -lacunes的6个)。多方数据都用于培训和评估。结果表明,整个团队和跨任务的性能都有很大的差异,对于任务1- EPV和任务2-微型微型且对任务3 -lacunes尚无实际的结果,其结果尤其有望。它还强调了可能阻止个人级别使用的情况的性能不一致,同时仍证明在人群层面上有用。
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计算机辅助方法为诊断和预测脑疾病显示了附加的价值,因此可以支持临床护理和治疗计划中的决策。本章将洞悉方法的类型,其工作,输入数据(例如认知测试,成像和遗传数据)及其提供的输出类型。我们将专注于诊断的特定用例,即估计患者的当前“状况”,例如痴呆症的早期检测和诊断,对脑肿瘤的鉴别诊断以及中风的决策。关于预测,即对患者的未来“状况”的估计,我们将缩小用例,例如预测多发性硬化症中的疾病病程,并预测脑癌治疗后患者的结局。此外,根据这些用例,我们将评估当前的最新方法,并强调当前对这些方法进行基准测试的努力以及其中的开放科学的重要性。最后,我们评估了计算机辅助方法的当前临床影响,并讨论了增加临床影响所需的下一步。
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放射线学使用定量医学成像特征来预测临床结果。目前,在新的临床应用中,必须通过启发式试验和纠正过程手动完成各种可用选项的最佳放射组方法。在这项研究中,我们提出了一个框架,以自动优化每个应用程序的放射线工作流程的构建。为此,我们将放射线学作为模块化工作流程,并为每个组件包含大量的常见算法。为了优化每个应用程序的工作流程,我们使用随机搜索和结合使用自动化机器学习。我们在十二个不同的临床应用中评估我们的方法,从而在曲线下导致以下区域:1)脂肪肉瘤(0.83); 2)脱粘型纤维瘤病(0.82); 3)原发性肝肿瘤(0.80); 4)胃肠道肿瘤(0.77); 5)结直肠肝转移(0.61); 6)黑色素瘤转移(0.45); 7)肝细胞癌(0.75); 8)肠系膜纤维化(0.80); 9)前列腺癌(0.72); 10)神经胶质瘤(0.71); 11)阿尔茨海默氏病(0.87);和12)头颈癌(0.84)。我们表明,我们的框架具有比较人类专家的竞争性能,优于放射线基线,并且表现相似或优于贝叶斯优化和更高级的合奏方法。最后,我们的方法完全自动优化了放射线工作流的构建,从而简化了在新应用程序中对放射线生物标志物的搜索。为了促进可重复性和未来的研究,我们公开发布了六个数据集,框架的软件实施以及重现这项研究的代码。
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Quantum computing (QC) promises significant advantages on certain hard computational tasks over classical computers. However, current quantum hardware, also known as noisy intermediate-scale quantum computers (NISQ), are still unable to carry out computations faithfully mainly because of the lack of quantum error correction (QEC) capability. A significant amount of theoretical studies have provided various types of QEC codes; one of the notable topological codes is the surface code, and its features, such as the requirement of only nearest-neighboring two-qubit control gates and a large error threshold, make it a leading candidate for scalable quantum computation. Recent developments of machine learning (ML)-based techniques especially the reinforcement learning (RL) methods have been applied to the decoding problem and have already made certain progress. Nevertheless, the device noise pattern may change over time, making trained decoder models ineffective. In this paper, we propose a continual reinforcement learning method to address these decoding challenges. Specifically, we implement double deep Q-learning with probabilistic policy reuse (DDQN-PPR) model to learn surface code decoding strategies for quantum environments with varying noise patterns. Through numerical simulations, we show that the proposed DDQN-PPR model can significantly reduce the computational complexity. Moreover, increasing the number of trained policies can further improve the agent's performance. Our results open a way to build more capable RL agents which can leverage previously gained knowledge to tackle QEC challenges.
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Electronic Health Records (EHRs) hold detailed longitudinal information about each patient's health status and general clinical history, a large portion of which is stored within the unstructured text. Temporal modelling of this medical history, which considers the sequence of events, can be used to forecast and simulate future events, estimate risk, suggest alternative diagnoses or forecast complications. While most prediction approaches use mainly structured data or a subset of single-domain forecasts and outcomes, we processed the entire free-text portion of EHRs for longitudinal modelling. We present Foresight, a novel GPT3-based pipeline that uses NER+L tools (i.e. MedCAT) to convert document text into structured, coded concepts, followed by providing probabilistic forecasts for future medical events such as disorders, medications, symptoms and interventions. Since large portions of EHR data are in text form, such an approach benefits from a granular and detailed view of a patient while introducing modest additional noise. On tests in two large UK hospitals (King's College Hospital, South London and Maudsley) and the US MIMIC-III dataset precision@10 of 0.80, 0.81 and 0.91 was achieved for forecasting the next biomedical concept. Foresight was also validated on 34 synthetic patient timelines by 5 clinicians and achieved relevancy of 97% for the top forecasted candidate disorder. Foresight can be easily trained and deployed locally as it only requires free-text data (as a minimum). As a generative model, it can simulate follow-on disorders, medications and interventions for as many steps as required. Foresight is a general-purpose model for biomedical concept modelling that can be used for real-world risk estimation, virtual trials and clinical research to study the progression of diseases, simulate interventions and counterfactuals, and for educational purposes.
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Reinforcement Learning has emerged as a strong alternative to solve optimization tasks efficiently. The use of these algorithms highly depends on the feedback signals provided by the environment in charge of informing about how good (or bad) the decisions made by the learned agent are. Unfortunately, in a broad range of problems the design of a good reward function is not trivial, so in such cases sparse reward signals are instead adopted. The lack of a dense reward function poses new challenges, mostly related to exploration. Imitation Learning has addressed those problems by leveraging demonstrations from experts. In the absence of an expert (and its subsequent demonstrations), an option is to prioritize well-suited exploration experiences collected by the agent in order to bootstrap its learning process with good exploration behaviors. However, this solution highly depends on the ability of the agent to discover such trajectories in the early stages of its learning process. To tackle this issue, we propose to combine imitation learning with intrinsic motivation, two of the most widely adopted techniques to address problems with sparse reward. In this work intrinsic motivation is used to encourage the agent to explore the environment based on its curiosity, whereas imitation learning allows repeating the most promising experiences to accelerate the learning process. This combination is shown to yield an improved performance and better generalization in procedurally-generated environments, outperforming previously reported self-imitation learning methods and achieving equal or better sample efficiency with respect to intrinsic motivation in isolation.
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Building trustworthy, effective, and responsible machine learning systems hinges on understanding how differences in training data and modeling decisions interact to impact predictive performance. In this work, we seek to better understand how we might characterize, detect, and design for data-model synergies. We focus on a particular type of data-model inefficiency, in which adding training data from some sources can actually lower performance evaluated on key sub-groups of the population, a phenomenon we refer to as negative data externalities on group performance. Such externalities can arise in standard learning settings and can manifest differently depending on conditions between training set size and model size. Data externalities directly imply a lower bound on feasible model improvements, yet improving models efficiently requires understanding the underlying data-model tensions. From a broader perspective, our results indicate that data-efficiency is a key component of both accurate and trustworthy machine learning.
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Two-stage robust optimization problems constitute one of the hardest optimization problem classes. One of the solution approaches to this class of problems is K-adaptability. This approach simultaneously seeks the best partitioning of the uncertainty set of scenarios into K subsets, and optimizes decisions corresponding to each of these subsets. In general case, it is solved using the K-adaptability branch-and-bound algorithm, which requires exploration of exponentially-growing solution trees. To accelerate finding high-quality solutions in such trees, we propose a machine learning-based node selection strategy. In particular, we construct a feature engineering scheme based on general two-stage robust optimization insights that allows us to train our machine learning tool on a database of resolved B&B trees, and to apply it as-is to problems of different sizes and/or types. We experimentally show that using our learned node selection strategy outperforms a vanilla, random node selection strategy when tested on problems of the same type as the training problems, also in case the K-value or the problem size differs from the training ones.
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